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  "Title": "Quality Control of Genome Wide Association Study Results",
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  "Author": "Peter J. van der Most and Ilja M. Nolte",
  "Maintainer": "Peter J. van der Most <p.j.van.der.most@umcg.nl>",
  "Description": "Tools for (automated and manual) quality control of the\nresults of Genome Wide Association Studies.",
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    "plot_skewness",
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    "QC_series",
    "QQ_plot",
    "QQ_series",
    "save_log",
    "switch_strand",
    "translate_header"
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        "IMPUTED",
        "IMP_QUALITY"
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      "object": "header_translations",
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      "table": true,
      "tojson": true
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    {
      "page": "QCGWAS-package",
      "title": "Quality Control of Genome Wide Association Study Results",
      "topics": [
        "QCGWAS-package",
        "QCGWAS"
      ]
    },
    {
      "page": "calc_kurtosis",
      "title": "Skewness and Kurtosis",
      "topics": [
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        "calc_skewness"
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    },
    {
      "page": "check_P",
      "title": "Checking GWAS p-values",
      "topics": [
        "check_P"
      ]
    },
    {
      "page": "convert_impstatus",
      "title": "Convert imputation-status values to the QCGWAS standard",
      "topics": [
        "convert_impstatus"
      ]
    },
    {
      "page": "create_hapmap_reference",
      "title": "Create an allele-reference file from HapMap data",
      "topics": [
        "create_hapmap_reference"
      ]
    },
    {
      "page": "filter_GWAS",
      "title": "Automated filtering and reformatting of GWAS results files",
      "topics": [
        "filter_GWAS"
      ]
    },
    {
      "page": "gwa_sample",
      "title": "Sample dataset for the QCGWAS package",
      "topics": [
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      ]
    },
    {
      "page": "header_translations",
      "title": "Translation table for GWAS dataset headers",
      "topics": [
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    },
    {
      "page": "HQ_filter",
      "title": "Select high-quality data in GWAS datasets",
      "topics": [
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      ]
    },
    {
      "page": "identify_column",
      "title": "Identify non-standard column names",
      "topics": [
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      ]
    },
    {
      "page": "intensity_plot",
      "title": "Generates an intensity plot from x, y datasets",
      "topics": [
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    {
      "page": "load_GWAS",
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      "topics": [
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        "load_test"
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    {
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      "title": "Check and correct alleles in GWAS result files",
      "topics": [
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    },
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      "title": "GWAS effect-Size distribution plot",
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      "title": "GWAS Precision Plot",
      "topics": [
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      ]
    },
    {
      "page": "plot_regional",
      "title": "Regional Association Plot",
      "topics": [
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      ]
    },
    {
      "page": "plot_skewness",
      "title": "GWAS Skewness vs. Kurtosis Plot",
      "topics": [
        "plot_skewness"
      ]
    },
    {
      "page": "QC_GWAS",
      "title": "Automated Quality Control of GWAS Results files",
      "topics": [
        "QC_GWAS",
        "QC_series"
      ]
    },
    {
      "page": "QC_histogram",
      "title": "Histogram(s) of expected and observed data distribution",
      "topics": [
        "histogram_series",
        "QC_histogram"
      ]
    },
    {
      "page": "QC_plots",
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      "topics": [
        "QC_plots"
      ]
    },
    {
      "page": "QQ_plot",
      "title": "QQ plot(s) of expected vs. reported p-values",
      "topics": [
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        "QQ_series"
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      "title": "Log entries for QC_GWAS",
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